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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2233922_2237373_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2233922 - 2237373

Intron Length:

3452

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTGTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCTTTTGTCACA

Flanking Amino Acid:

KNKKDSLRHSRFRLDIYRCL

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.6

33.3

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

83.7

0.76

0.8

79.1

32.9

Minor 5ss

37.9

-1.4

3.3

56.5

47.6

Minor BPS

47.2

-0.2

2.3

65.59

41.9

Associated Gene:

Gene:

TRPC1

Ensembl Gene ID:

ENSAPLG00000002664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002748

2221401 - 2241659

20259