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Intron Name: Anas_platyrhynchos_platyrhynchos_9_22359096_22359593_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

22359096 - 22359593

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGTACAC

5'SS Class:

major

3'SS Sequence:

GGAACTGATTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

GCTGTATTAATT

Flanking Amino Acid:

SLPVSVSSAEELFSESAWTG

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

58.8

40.5

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

52.2

0.05

1.1

47.7

44.8

Minor 5ss

30.9

-2.2

3.3

41.7

Minor BPS

54.2

0.21

1.7

68.96

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021977

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020715

22348913 - 22369308

20396

ENSAPLT00000023563

22347144 - 22369308

22165