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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2240007_2241523_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2240007 - 2241523

Intron Length:

1517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGGCC

5'SS Class:

major

3'SS Sequence:

GTTGGTGGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

ATGCTCATACGT

Flanking Amino Acid:

EKLFLLACDKGDYYMVKKLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

69.7

36.5

Major BPS

70.8

0.52

70.6

31.6

Major PPT

64.7

0.33

1.1

57.5

47.4

Minor 5ss

29.4

-2.4

3.6

41.9

45.1

Minor BPS

42.8

-0.4

60.04

43.5

Associated Gene:

Gene:

TRPC1

Ensembl Gene ID:

ENSAPLG00000002664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002748

2221401 - 2241659

20259