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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2244526_2246654_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2244526 - 2246654

Intron Length:

2129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCAAA

5'SS Class:

strong_major

3'SS Sequence:

TATTTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TTTTACGTATTT

Flanking Amino Acid:

NKKTSITSFKDKSISTSLPV

Intron Amino Acid Position:

545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

76.1

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

86.8

0.83

0.7

85.8

28.4

Minor 5ss

38.8

-1.3

2.8

48.7

47.1

Minor BPS

49.9

0.07

2.4

80.67

41.5

Associated Gene:

Gene:

PLS1

Ensembl Gene ID:

ENSAPLG00000003150

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003268

2243892 - 2265688

21797