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Intron Name: Anas_platyrhynchos_platyrhynchos_9_22461140_22482332_F

Intron Information:

Intron Rank:

143654

Intron Class:

major

Intron Phase:

Intron Coordinates:

22461140 - 22482332

Intron Length:

21193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

TTTTTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGATGAA

U12 Branch Point Sequence:

CTGGGATGAACG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

74.7

41.5

Major BPS

-0.1

1.3

37.5

42.1

Major PPT

93.6

0.98

0.6

89.1

19.8

Minor 5ss

39.4

-1.2

2.9

52.3

44.3

Minor BPS

40.8

-0.8

2.1

44.86

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027405

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031497

22459933 - 22482417

22485

ENSAPLT00000017635

22457645 - 22482417

24773