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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2261088_2261470_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2261088 - 2261470

Intron Length:

383

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAAAT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTATTTTAATG

Flanking Amino Acid:

STEGTQHSYSEEEKVAFVNW

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

82.6

29.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.5

0.69

0.9

77.4

41.2

Minor 5ss

35.2

-1.7

49.1

46.7

Minor BPS

64.8

0.33

1.3

65.7

36.6

Associated Gene:

Gene:

PLS1

Ensembl Gene ID:

ENSAPLG00000003150

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003268

2243892 - 2265688

21797