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Intron Name: Anas_platyrhynchos_platyrhynchos_9_22701594_22704845_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
5UTR

Intron Coordinates:
22701594 - 22704845

Intron Length:
3252

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTAAGTGAT

5'SS Class:
strong_major

3'SS Sequence:
TCCTGTGTTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TAGTAAT

U12 Branch Point Sequence:
TAATCTTGAATT

Flanking Amino Acid:
5UTR

Intron Amino Acid Position:
5UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.6
0.89
0.9
81.4
32.7

Major BPS
76.6
0.66
1.1
75.9
36.3

Major PPT
78.9
0.65
0.9
75.9
38

Minor 5ss
33.9
-1.8
3.3
40.8
45.4

Minor BPS
68
0.64
1.3
79.1
36.8

Associated Gene:

Gene:
BCHE

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22701142 - 22734754
33613