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Intron Name: Anas_platyrhynchos_platyrhynchos_9_22728465_22734583_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
22728465 - 22734583

Intron Length:
6119

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAAAATG

5'SS Class:
strong_major

3'SS Sequence:
TCATGTTTTACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATTTCAT

U12 Branch Point Sequence:
ATTAGTGTAACC

Flanking Amino Acid:
TFFPKVLEMTGNIDEAEREW

Intron Amino Acid Position:
585

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.1
0.78
0.9
77.9
36.7

Major BPS
91.2
1.02
0.7
91.7
20.2

Major PPT
81.8
0.72
0.9
75.7
38

Minor 5ss
36.4
-1.5
3.1
48.5
47.2

Minor BPS
47
-0.2
2.3
64.99
40.9

Associated Gene:

Gene:
BCHE

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22679870 - 22734711
54842

22662186 - 22734711
72526