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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2284226_2285085_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2284226 - 2285085

Intron Length:

860

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTAAAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

IDRILTDVDVVALELIKKSD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.9

90.9

28.7

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

87.3

0.84

0.9

89.9

23.6

Minor 5ss

41.2

-1

2.9

52.2

44.4

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023352

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035126

2282667 - 2285312

2646