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Intron Name: Anas_platyrhynchos_platyrhynchos_9_23032_23556_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23032 - 23556

Intron Length:

525

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCGA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TCTTTCTTCCTT

Flanking Amino Acid:

EFFQSPEVMAGDILNLQVYY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

85.1

0.79

0.7

80.9

24.2

Minor 5ss

30.1

-2.3

3.2

38.9

46.2

Minor BPS

43.3

-0.4

3.6

74.4

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023328

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025162

22839 - 25118

2280