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Intron Name: Anas_platyrhynchos_platyrhynchos_9_23162048_23176947_R

Intron Information:

Intron Rank:

136783

Intron Class:

major

Intron Phase:

Intron Coordinates:

23162048 - 23176947

Intron Length:

14900

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTGT

5'SS Class:

strong_major

3'SS Sequence:

GCTTCCCAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAA

U12 Branch Point Sequence:

TTTCTGTTACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

79.5

36.8

Major BPS

63.1

0.33

1.2

72.7

34.3

Major PPT

64.6

0.33

59.1

36.1

Minor 5ss

38.5

-1.3

3.4

55.9

48.3

Minor BPS

49.4

0.04

2.3

76.4

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021081

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034497

23161419 - 23177563

16145