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Intron Name: Anas_platyrhynchos_platyrhynchos_9_23264787_23267426_R

Intron Information:

Intron Rank:

138684

Intron Class:

major

Intron Phase:

Intron Coordinates:

23264787 - 23267426

Intron Length:

2640

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

TCTACATCCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

80.1

0.68

0.9

73.8

36.9

Minor 5ss

35.3

-1.7

3.4

50.1

46.5

Minor BPS

46.5

-0.2

2.3

70.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042273

23254461 - 23272892

18432