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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2330229_2330322_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2330229 - 2330322

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCATTGCA

5'SS Class:

major

3'SS Sequence:

TTTCTCCATGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATATGCTTATTT

Flanking Amino Acid:

GVTVYLSGHETPGEGEHKIM

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.3

67.9

37.4

Major BPS

88.7

0.96

0.8

36.5

Major PPT

82.8

0.74

0.8

78.1

29.5

Minor 5ss

28.5

-2.5

2.9

41.2

Minor BPS

55.4

0.25

75.08

Associated Gene:

Gene:

XRN1

Ensembl Gene ID:

ENSAPLG00000004905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037087

2325453 - 2347668

22216

ENSAPLT00000005097

2325453 - 2349381

23929