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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2330434_2330660_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2330434 - 2330660

Intron Length:

227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTGTAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTCTAATATCT

Flanking Amino Acid:

HCLYGLDADLIMLGLTSHEA

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

0.9

32.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

0.49

0.9

68.9

35.9

Minor 5ss

38.2

-1.3

3.1

45.3

45.2

Minor BPS

47.6

-0.1

2.1

75.57

40.6

Associated Gene:

Gene:

XRN1

Ensembl Gene ID:

ENSAPLG00000004905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037087

2325453 - 2347668

22216

ENSAPLT00000005097

2325453 - 2349381

23929