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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2330744_2332765_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2330744 - 2332765

Intron Length:

2022

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAACTGC

5'SS Class:

major

3'SS Sequence:

GAATAATTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTATAAATAACT

Flanking Amino Acid:

EVRFGGKKSQRACAPEETTF

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

62.5

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

67.4

0.39

1.1

58.4

45.8

Minor 5ss

38.1

-1.3

3.1

50.2

46.4

Minor BPS

54.2

0.21

2.1

80.86

39.7

Associated Gene:

Gene:

XRN1

Ensembl Gene ID:

ENSAPLG00000004905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037087

2325453 - 2347668

22216

ENSAPLT00000005097

2325453 - 2349381

23929