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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2334672_2335569_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2334672 - 2335569

Intron Length:

898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

ATTACTTTAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTACTTAATC

Flanking Amino Acid:

ARNNKQKKQKAQENSLCLAA

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

86.4

29.2

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

70.9

0.47

0.9

66.7

38.7

Minor 5ss

-1.7

3.3

46.3

Minor BPS

80.9

0.95

1.3

87.54

28.7

Associated Gene:

Gene:

XRN1

Ensembl Gene ID:

ENSAPLG00000004905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037087

2325453 - 2347668

22216

ENSAPLT00000005097

2325453 - 2349381

23929