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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2336501_2336810_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2336501 - 2336810

Intron Length:

310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

TTTTTATTTTAAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATCTTTTTATTT

Flanking Amino Acid:

MTKMGVEVVSDDFLADQAEC

Intron Amino Acid Position:

455

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

35.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.8

0.74

87.8

28.8

Minor 5ss

39.9

-1.1

3.4

54.7

43.6

Minor BPS

59.2

0.37

1.5

72.97

39.1

Associated Gene:

Gene:

XRN1

Ensembl Gene ID:

ENSAPLG00000004905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037087

2325453 - 2347668

22216

ENSAPLT00000005097

2325453 - 2349381

23929