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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2337670_2338735_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2337670 - 2338735

Intron Length:

1066

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATTAT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTAAATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

TTTCTCTTAAAT

Flanking Amino Acid:

AVVLIPFIDERRLLQAMEPC

Intron Amino Acid Position:

578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

86.4

23.9

Major BPS

77.8

0.69

78.2

31.8

Major PPT

69.5

0.44

0.9

67.6

Minor 5ss

41.2

-1

57.8

46.8

Minor BPS

77.3

0.93

1.3

90.72

Associated Gene:

Gene:

XRN1

Ensembl Gene ID:

ENSAPLG00000004905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037087

2325453 - 2347668

22216

ENSAPLT00000005097

2325453 - 2349381

23929