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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2338906_2342422_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2338906 - 2342422

Intron Length:

3517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTCTG

5'SS Class:

strong_major

3'SS Sequence:

TAATATTCTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

ATTTGGTTAAAT

Flanking Amino Acid:

KFPAIERCHTRFYLEEPHGT

Intron Amino Acid Position:

634

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

74.6

41.7

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

64.3

0.32

1.1

61.3

44.1

Minor 5ss

37.9

-1.4

50.1

46.1

Minor BPS

51.1

0.11

2.5

79.57

42.3

Associated Gene:

Gene:

XRN1

Ensembl Gene ID:

ENSAPLG00000004905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037087

2325453 - 2347668

22216