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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2341912_2342422_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2341912 - 2342422

Intron Length:

511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TAATATTCTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

ATTTGGTTAAAT

Flanking Amino Acid:

RVVAVSDGETKFYLEEPHGT

Intron Amino Acid Position:

742

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

89.8

22.2

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

64.3

0.32

1.1

61.3

44.1

Minor 5ss

39.1

-1.2

2.8

51.7

39.1

Minor BPS

51.1

0.11

2.5

79.57

42.3

Associated Gene:

Gene:

XRN1

Ensembl Gene ID:

ENSAPLG00000004905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005097

2325453 - 2349381

23929