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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2342555_2343285_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2342555 - 2343285

Intron Length:

731

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

ATTTTGTGCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTATTGTAATC

Flanking Amino Acid:

WLKEVQGLSEHYQRRKGIII

Intron Amino Acid Position:

786

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

75.5

34.3

Major BPS

84.4

0.85

1.1

34.5

Major PPT

0.56

73.3

41.4

Minor 5ss

38.2

-1.3

2.8

51.4

39.2

Minor BPS

53.2

0.08

69.89

36.2

Associated Gene:

Gene:

XRN1

Ensembl Gene ID:

ENSAPLG00000004905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037087

2325453 - 2347668

22216

ENSAPLT00000005097

2325453 - 2349381

23929