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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2343449_2343907_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2343449 - 2343907

Intron Length:

459

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTATATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTAATTTAATC

Flanking Amino Acid:

LPFVYQTVVKDIKAFDSRFS

Intron Amino Acid Position:

841

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

83.1

28.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

87.5

0.84

0.7

84.9

28.8

Minor 5ss

35.4

-1.7

2.7

43.5

43.6

Minor BPS

66.9

0.51

1.5

34.1

Associated Gene:

Gene:

XRN1

Ensembl Gene ID:

ENSAPLG00000004905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037087

2325453 - 2347668

22216

ENSAPLT00000005097

2325453 - 2349381

23929