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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2344022_2344467_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2344022 - 2344467

Intron Length:

446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTTAGTTCA

5'SS Class:

major

3'SS Sequence:

GTTTCTCTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTGTTTTTAATT

Flanking Amino Acid:

GSPYYGCMGEVQDSRDVIPE

Intron Amino Acid Position:

879

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.2

72.6

32.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.6

0.46

33.7

Minor 5ss

38.6

-1.3

2.6

43.9

37.1

Minor BPS

71.1

0.74

1.2

78.42

39.1

Associated Gene:

Gene:

XRN1

Ensembl Gene ID:

ENSAPLG00000004905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037087

2325453 - 2347668

22216

ENSAPLT00000005097

2325453 - 2349381

23929