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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2344567_2344727_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2344567 - 2344727

Intron Length:

161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCCAA

U12 Branch Point Sequence:

TTTGTTTTAAAG

Flanking Amino Acid:

QLDPLIQNQHKYSVKYNPAY

Intron Amino Acid Position:

912

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

86.5

28.5

Major BPS

0.07

1.4

64.5

42.8

Major PPT

74.5

0.55

1.1

74.5

39.3

Minor 5ss

40.8

-1

2.8

57.5

39.6

Minor BPS

62.1

0.24

1.6

67.62

40.4

Associated Gene:

Gene:

XRN1

Ensembl Gene ID:

ENSAPLG00000004905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037087

2325453 - 2347668

22216

ENSAPLT00000005097

2325453 - 2349381

23929