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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2344844_2345985_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2344844 - 2345985

Intron Length:

1142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTATTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTTCTTATTT

Flanking Amino Acid:

SIFIGRGSKKNPHGDHKANV

Intron Amino Acid Position:

950

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.5

27.6

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

84.3

0.77

0.7

77.7

35.7

Minor 5ss

42.2

-0.9

2.7

50.9

39.6

Minor BPS

75.8

0.89

1.5

91.23

32.5

Associated Gene:

Gene:

XRN1

Ensembl Gene ID:

ENSAPLG00000004905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037087

2325453 - 2347668

22216

ENSAPLT00000005097

2325453 - 2349381

23929