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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2346133_2346488_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2346133 - 2346488

Intron Length:

356

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGATAGA

5'SS Class:

major

3'SS Sequence:

ATTCGCTCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTCTCTTTTATT

Flanking Amino Acid:

VEQLLAEYLERVPELFNYIA

Intron Amino Acid Position:

999

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

71.3

40.5

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

73.1

0.52

0.8

66.8

34.8

Minor 5ss

33.1

-1.9

42.3

44.5

Minor BPS

68.7

0.67

1.6

83.34

38.2

Associated Gene:

Gene:

XRN1

Ensembl Gene ID:

ENSAPLG00000004905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037087

2325453 - 2347668

22216

ENSAPLT00000005097

2325453 - 2349381

23929