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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2346579_2347526_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2346579 - 2347526

Intron Length:

948

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCACT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

ATAGTTGTAATT

Flanking Amino Acid:

DDIWPGEDENGAEKVQEIVA

Intron Amino Acid Position:

1029

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

75.3

40.8

Major BPS

84.4

0.85

1.1

34.5

Major PPT

78.9

0.65

0.8

76.2

32.4

Minor 5ss

41.6

-0.9

2.9

45.2

Minor BPS

47.6

-0.1

65.81

39.9

Associated Gene:

Gene:

XRN1

Ensembl Gene ID:

ENSAPLG00000004905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037087

2325453 - 2347668

22216

ENSAPLT00000005097

2325453 - 2349381

23929