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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2347663_2348414_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2347663 - 2348414

Intron Length:

752

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAACA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCCTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TAATTTTTAATG

Flanking Amino Acid:

KIEEEIEKCKQRKSNKKVRV

Intron Amino Acid Position:

1075

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

76.1

32.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.9

0.74

0.6

81.7

23.2

Minor 5ss

39.8

-1.1

2.8

Minor BPS

67.1

0.4

1.3

64.67

37.6

Associated Gene:

Gene:

XRN1

Ensembl Gene ID:

ENSAPLG00000004905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005097

2325453 - 2349381

23929