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Intron Name: Anas_platyrhynchos_platyrhynchos_9_2377795_2378989_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2377795 - 2378989

Intron Length:

1195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTAG

5'SS Class:

strong_major

3'SS Sequence:

GAAAATAATAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

GTTTCATGGAAA

Flanking Amino Acid:

TGGNLYASKRDLYPLIGWKI

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.9

74.9

38.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

46.9

-0.1

1.2

38.8

42.2

Minor 5ss

43.2

-0.7

2.9

49.2

Minor BPS

49.3

-0

1.9

66.87

38.5

Associated Gene:

Gene:

GK5

Ensembl Gene ID:

ENSAPLG00000005240

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005451

2367880 - 2390341

22462