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Intron Name: Anas_platyrhynchos_platyrhynchos_9_23779086_23782529_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

23779086 - 23782529

Intron Length:

3444

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTGGGATC

5'SS Class:

major

3'SS Sequence:

GTCCTAGGTGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

TCTGTCCTAGGT

Flanking Amino Acid:

GSFMVRLAGAAGVKGNKGSY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.1

0.29

1.2

61.7

42.8

Major BPS

62.2

0.3

1.2

38.7

Major PPT

52.8

0.06

1.2

52.3

Minor 5ss

31.9

-2.1

3.3

40.8

39.8

Minor BPS

43.5

-0.4

2.2

63.51

46.9

Associated Gene:

Gene:

OTOL1

Ensembl Gene ID:

ENSAPLG00000030571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047854

23778196 - 23782611

4416