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Intron Name: Anas_platyrhynchos_platyrhynchos_9_23820267_23820809_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23820267 - 23820809

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGGCA

5'SS Class:

major

3'SS Sequence:

GTCCTTGTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

ACAACTTTGATA

Flanking Amino Acid:

WKAVVQVRQKTLHKKTFFYL

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

39.1

Major BPS

82.1

0.8

71.6

36.4

Major PPT

74.9

0.56

0.9

72.7

37.5

Minor 5ss

27.5

-2.6

3.7

38.3

46.9

Minor BPS

54.9

0.15

1.2

57.36

36.1

Associated Gene:

Gene:

NMD3

Ensembl Gene ID:

ENSAPLG00000014786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015453

23818225 - 23828367

10143