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Intron Name: Anas_platyrhynchos_platyrhynchos_9_23821063_23821370_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23821063 - 23821370

Intron Length:

308

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACATCAC

5'SS Class:

major

3'SS Sequence:

TTGTGTTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATGAAA

U12 Branch Point Sequence:

GCCGCATGAAAG

Flanking Amino Acid:

VDFLQCTVPSRSKSSQRLTS

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

65.8

40.2

Major BPS

48.1

-0.1

1.3

57.3

36.3

Major PPT

81.5

0.71

0.8

77.2

37.1

Minor 5ss

32.8

-2

3.2

43.8

43.9

Minor BPS

41.3

-0.8

1.9

39.38

43.5

Associated Gene:

Gene:

NMD3

Ensembl Gene ID:

ENSAPLG00000014786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015453

23818225 - 23828367

10143