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Intron Name: Anas_platyrhynchos_platyrhynchos_9_23821858_23822663_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23821858 - 23822663

Intron Length:

806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTCT

5'SS Class:

major

3'SS Sequence:

GTTTGTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TGATTGCCATTC

Flanking Amino Acid:

VHLIDPSTLQIAEIDGNTYW

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

75.2

35.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

85.4

0.8

0.9

76.9

42.1

Minor 5ss

44.1

-0.6

2.8

56.3

41.9

Minor BPS

34.5

-1.1

2.2

44.43

37.5

Associated Gene:

Gene:

NMD3

Ensembl Gene ID:

ENSAPLG00000014786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015453

23818225 - 23828367

10143