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Intron Name: Anas_platyrhynchos_platyrhynchos_9_23824579_23825128_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23824579 - 23825128

Intron Length:

550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAATAT

U12 Branch Point Sequence:

GCATGTGTAAAT

Flanking Amino Acid:

KMNPHSIPDVVLIKKSYDRA

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.1

32.7

Major BPS

59.7

0.24

1.1

55.7

39.9

Major PPT

86.8

0.83

0.7

81.5

30.6

Minor 5ss

33.9

-1.8

2.9

38.9

40.1

Minor BPS

42.4

-0.5

2.3

58.21

44.8

Associated Gene:

Gene:

NMD3

Ensembl Gene ID:

ENSAPLG00000014786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015453

23818225 - 23828367

10143