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Intron Name: Anas_platyrhynchos_platyrhynchos_9_23825236_23826099_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23825236 - 23826099

Intron Length:

864

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTTGT

5'SS Class:

major

3'SS Sequence:

GCATCTTTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAA

U12 Branch Point Sequence:

GCATCTTTTACA

Flanking Amino Acid:

DKEGMDTDDERQYQDFLEDL

Intron Amino Acid Position:

437

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.2

72.6

39.2

Major BPS

67.4

0.43

1.1

67.9

36.3

Major PPT

78.5

0.64

0.9

71.9

37.9

Minor 5ss

44.4

-0.6

2.5

59.5

44.9

Minor BPS

59.5

0.29

1.6

64.53

41.6

Associated Gene:

Gene:

NMD3

Ensembl Gene ID:

ENSAPLG00000014786

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015453

23818225 - 23828367

10143