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Intron Name: Anas_platyrhynchos_platyrhynchos_9_23891224_23899667_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23891224 - 23899667

Intron Length:

8444

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTTT

5'SS Class:

strong_major

3'SS Sequence:

ATCCGTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

CTTGCCTTCATC

Flanking Amino Acid:

EKLTVSYDEAGTTCLIALLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

81.2

33.3

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

70.7

0.47

0.9

61.6

39.4

Minor 5ss

48.8

-0.1

3.1

72.7

44.5

Minor BPS

58.9

0.26

1.9

69.44

42.9

Associated Gene:

Gene:

PPM1L

Ensembl Gene ID:

ENSAPLG00000007428

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007709

23855398 - 23902932

47535

ENSAPLT00000025425

23856529 - 23902932

46404