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Intron Name: Anas_platyrhynchos_platyrhynchos_9_23899830_23902585_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23899830 - 23902585

Intron Length:

2756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

AAGGTTTTAACA

Flanking Amino Acid:

LKERKRIKRAGGFISFNGSW

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

76.2

28.3

Major BPS

89.7

0.98

0.7

89.9

Major PPT

83.2

0.75

0.8

74.4

36.5

Minor 5ss

35.2

-1.7

2.8

40.3

40.2

Minor BPS

59.4

0.29

1.4

61.9

38.7

Associated Gene:

Gene:

PPM1L

Ensembl Gene ID:

ENSAPLG00000007428

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025425

23856529 - 23902932

46404

ENSAPLT00000007709

23855398 - 23902932

47535