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Intron Name: Anas_platyrhynchos_platyrhynchos_9_23915491_23916791_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

23915491 - 23916791

Intron Length:

1301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCAGC

5'SS Class:

major

3'SS Sequence:

CTTTCTGCATGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTCTCTTTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

67.4

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

0.07

1.7

66.6

39.4

Minor 5ss

40.2

-1.1

2.9

Minor BPS

83.8

1.14

91.31

32.6

Associated Gene:

Gene:

B3GALNT1

Ensembl Gene ID:

ENSAPLG00000017340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025846

23912540 - 23917326

4787