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Intron Name: Anas_platyrhynchos_platyrhynchos_9_23980520_23981196_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23980520 - 23981196

Intron Length:

677

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTTTGTCAA

5'SS Class:

major

3'SS Sequence:

TAACTTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

CAAACTATAACT

Flanking Amino Acid:

LDPFSEGIMFSVRPPKKSWK

Intron Amino Acid Position:

1174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.2

38.6

Major BPS

71.2

0.53

70.3

31.9

Major PPT

80.5

0.69

0.9

77.6

36.1

Minor 5ss

-1.6

2.6

41.5

44.9

Minor BPS

53.3

0.18

1.7

67.93

42.4

Associated Gene:

Gene:

SMC4

Ensembl Gene ID:

ENSAPLG00000006895

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007245

23979395 - 24011026

31632