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Intron Name: Anas_platyrhynchos_platyrhynchos_9_23984290_23984616_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23984290 - 23984616

Intron Length:

327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGTAG

5'SS Class:

strong_major

3'SS Sequence:

GGTATCCATTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATACAA

U12 Branch Point Sequence:

ACTCATGTAAAG

Flanking Amino Acid:

KAQVAIKSAQRNMKKSEEAV

Intron Amino Acid Position:

929

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

68.3

39.1

Major BPS

65.8

0.39

73.3

31.3

Major PPT

67.8

0.4

63.2

43.1

Minor 5ss

42.2

-0.9

3.1

54.5

49.7

Minor BPS

-0.8

2.1

45.23

40.9

Associated Gene:

Gene:

SMC4

Ensembl Gene ID:

ENSAPLG00000006895

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007245

23979395 - 24011026

31632