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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24009692_24010829_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24009692 - 24010829

Intron Length:

1138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTCTG

5'SS Class:

strong_major

3'SS Sequence:

GGATGGTTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTCTGCTTATTT

Flanking Amino Acid:

NGQLGEVQPQAVSNEVPDNR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.7

44.5

Major BPS

0.92

0.9

86.2

29.1

Major PPT

63.2

0.3

1.1

58.3

47.1

Minor 5ss

36.4

-1.5

3.3

47.2

Minor BPS

58.9

0.36

79.24

43.6

Associated Gene:

Gene:

SMC4

Ensembl Gene ID:

ENSAPLG00000006895

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007245

23979395 - 24011026

31632