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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24015500_24016225_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

24015500 - 24016225

Intron Length:

726

Sequence Information:

Terminal Dinucleotides:

AT-AC

5'SS Sequence:

AGC|ATATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

AATTTAATTAAAC|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

ATTTCCTTAATT

Flanking Amino Acid:

LKTSLLKEPKHKELVSCVGW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

28.4

-1.3

3.4

44.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

37.6

-0.7

3.2

54.3

43.4

Minor 5ss

94.6

1.49

0.9

84.9

32.8

Minor BPS

91.4

1.38

0.7

98.58

23.5

Associated Gene:

Gene:

IFT80

Ensembl Gene ID:

ENSAPLG00000006299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045057

24015419 - 24060044

44626

ENSAPLT00000006589

24015419 - 24060684

45266