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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24026495_24031518_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24026495 - 24031518

Intron Length:

5024

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTCAT

U12 Branch Point Sequence:

TAAGTCATAAGA

Flanking Amino Acid:

GMLRSTLAQQGTPVYSVAWG

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.1

1.11

0.7

89.3

17.5

Major BPS

68.2

0.45

1.1

69.4

37.7

Major PPT

82.9

0.74

0.9

76.6

37.7

Minor 5ss

39.5

-1.2

2.8

47.2

Minor BPS

46.7

-0.2

1.9

57.82

41.5

Associated Gene:

Gene:

IFT80

Ensembl Gene ID:

ENSAPLG00000006299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045057

24015419 - 24060044

44626

ENSAPLT00000006589

24015419 - 24060684

45266