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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24033219_24041718_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24033219 - 24041718

Intron Length:

8500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCTGCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAGAA

U12 Branch Point Sequence:

AGGTTAAGAACT

Flanking Amino Acid:

HTLRLCDKTGWSYALEKPNT

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.9

Major BPS

58.2

0.21

1.1

55.4

40.4

Major PPT

67.3

0.39

1.1

67.8

Minor 5ss

-1.5

2.8

43.1

43.9

Minor BPS

44.7

-0.3

1.9

62.35

40.9

Associated Gene:

Gene:

IFT80

Ensembl Gene ID:

ENSAPLG00000006299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045057

24015419 - 24060044

44626

ENSAPLT00000006589

24015419 - 24060684

45266