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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24041899_24044449_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24041899 - 24044449

Intron Length:

2551

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCCTA

5'SS Class:

major

3'SS Sequence:

TTTTCTCGATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTTTATTCAACC

Flanking Amino Acid:

ITLIKRRTMQVHNVIDDAVD

Intron Amino Acid Position:

320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

70.8

41.1

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

73.7

0.53

0.9

75.2

34.5

Minor 5ss

41.5

-0.9

3.1

56.7

47.4

Minor BPS

66.2

0.49

1.7

79.77

Associated Gene:

Gene:

IFT80

Ensembl Gene ID:

ENSAPLG00000006299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045057

24015419 - 24060044

44626

ENSAPLT00000006589

24015419 - 24060684

45266