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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24044569_24045416_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24044569 - 24045416

Intron Length:

848

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTC|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

CTTTTTCTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

ATGGTTTTAACA

Flanking Amino Acid:

ASTSLQCYVFSTKNWNTPLI

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.3

74.1

36.5

Major BPS

89.7

0.98

0.7

89.9

Major PPT

88.5

0.87

0.6

22.7

Minor 5ss

37.5

-1.4

2.7

46.4

36.1

Minor BPS

64.5

0.45

1.4

68.54

38.5

Associated Gene:

Gene:

IFT80

Ensembl Gene ID:

ENSAPLG00000006299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045057

24015419 - 24060044

44626

ENSAPLT00000006589

24015419 - 24060684

45266