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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24045492_24047120_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24045492 - 24047120

Intron Length:

1629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCTTAC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAA

U12 Branch Point Sequence:

ATATTATTAAGC

Flanking Amino Acid:

GTVTLILQAERHFLLVDGGG

Intron Amino Acid Position:

384

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.2

69.3

38.5

Major BPS

75.5

0.63

66.3

40.4

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

44.6

-0.6

60.6

44.5

Minor BPS

54.2

0.11

1.9

66.52

38.7

Associated Gene:

Gene:

IFT80

Ensembl Gene ID:

ENSAPLG00000006299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006589

24015419 - 24060684

45266

ENSAPLT00000045057

24015419 - 24060044

44626