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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24047285_24050786_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24047285 - 24050786

Intron Length:

3502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTGATTTTAACT

Flanking Amino Acid:

LAVKDKADEKVIYIFDALSG

Intron Amino Acid Position:

439

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.4

33.4

Major BPS

89.7

0.98

0.7

89.9

Major PPT

0.85

0.7

85.6

29.1

Minor 5ss

42.4

-0.8

2.8

51.5

44.9

Minor BPS

73.4

0.81

1.2

83.9

37.2

Associated Gene:

Gene:

IFT80

Ensembl Gene ID:

ENSAPLG00000006299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006589

24015419 - 24060684

45266

ENSAPLT00000045057

24015419 - 24060044

44626