Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_2404766_2410272_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2404766 - 2410272

Intron Length:

5507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAA

U12 Branch Point Sequence:

CATATTTTAAGA

Flanking Amino Acid:

KQYSDMTAKNVGVTSTNGDL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.9

86.1

24.6

Major BPS

78.5

0.71

0.9

69.7

37.1

Major PPT

78.8

0.65

77.4

41.2

Minor 5ss

46.2

-0.4

2.8

62.8

Minor BPS

52.2

0.07

1.7

60.18

40.2

Associated Gene:

Gene:

TFDP2

Ensembl Gene ID:

ENSAPLG00000005603

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030142

2404674 - 2439973

35300