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Intron Name: Anas_platyrhynchos_platyrhynchos_9_24051527_24052031_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24051527 - 24052031

Intron Length:

505

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTAAATTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTATCTTTAAAT

Flanking Amino Acid:

FGKEQKIVKIGTMVQTLAWN

Intron Amino Acid Position:

506

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

82.1

24.6

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

66.1

0.36

1.1

38.7

Minor 5ss

27.3

-2.6

2.7

30.6

42.8

Minor BPS

79.5

1.2

90.31

Associated Gene:

Gene:

IFT80

Ensembl Gene ID:

ENSAPLG00000006299

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045057

24015419 - 24060044

44626

ENSAPLT00000006589

24015419 - 24060684

45266